Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs12253284 chr10:104665145 G/C 3.19E-9 501 31.03 34.18 29.58 KM Plot
THCA rs12253370 chr10:104996259 G/C 0.000103 500 31.03 35.6 32.1 KM Plot
THCA rs12253834 chr10:104646297 T/C 7.75E-14 501 31.15 36.17 32.1 KM Plot
THCA rs12254254 chr10:104765605 C/T 6.98E-14 503 31.15 36.02 32.1 KM Plot
THCA rs12257935 chr10:104803062 C/A 6.92E-14 503 31.27 35.33 32.1 KM Plot
THCA rs12257941 chr10:104833161 C/T 6.92E-14 503 31.27 35.33 32.1 KM Plot
THCA rs12258551 chr10:104767892 C/G 6.98E-14 503 31.15 36.02 32.1 KM Plot
THCA rs12258949 chr10:104727524 G/T 2.73E-9 503 31.03 34.83 29.58 KM Plot
THCA rs12259362 chr10:131935267 C/T 1.33E-5 498 31.47 33.3 27.18 KM Plot
THCA rs12259552 chr10:131935484 C/T 1.21E-5 502 31.47 32.9 27.18 KM Plot
THCA rs12261040 chr10:104665397 T/C 3.19E-9 501 31.03 34.18 29.58 KM Plot
THCA rs12262460 chr10:131973632 A/T 1.22E-5 502 31.47 32.37 27.18 KM Plot
THCA rs12264456 chr10:104830634 C/T 6.92E-14 503 31.27 35.33 32.1 KM Plot
THCA rs12264552 chr10:29327519 G/A 2.68E-9 501 31.8 30.13 29.28 KM Plot
THCA rs12266291 chr10:104806884 G/A 6.92E-14 503 31.27 35.33 32.1 KM Plot